refer(1) — Linux manual page

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refer(1)                 General Commands Manual                refer(1)

Name         top

       refer - process bibliographic references for groff

Synopsis         top

       refer [-benCPRS] [-a n] [-B field.macro] [-c fields] [-f n]
             [-i fields] [-k field] [-l m,n] [-p databse-file]
             [-s fields] [-t n] [file ...]

       refer --help

       refer -v
       refer --version

Description         top

       This file documents the GNU version of refer, which is part of
       the groff(1) document formatting system.  refer copies the
       contents of file ... to the standard output stream, except that
       lines between .[ and .] are interpreted as citations, and lines
       between .R1 and .R2 are interpreted as commands about how
       citations are to be processed.

       Each citation specifies a reference.  The citation can specify a
       reference that is contained in a bibliographic database by giving
       a set of keywords that only that reference contains.
       Alternatively it can specify a reference by supplying a database
       record in the citation.  A combination of these alternatives is
       also possible.

       For each citation, refer can produce a mark in the text.  This
       mark consists of some label which can be separated from the text
       and from other labels in various ways.  For each reference it
       also outputs groff(7) language commands that can be used by a
       macro package to produce a formatted reference for each citation.
       The output of refer must therefore be processed using a suitable
       macro package, such as ms, man, me, or mm.  The commands to
       format a citation's reference can be output immediately after the
       citation, or the references may be accumulated, and the commands
       output at some later point.  If the references are accumulated,
       then multiple citations of the same reference will produce a
       single formatted reference.

       The interpretation of lines between .R1 and .R2 as commands is a
       new feature of GNU refer.  Documents making use of this feature
       can still be processed by AT&T refer just by adding the lines
              .de R1
              .ig R2
              ..
       to the beginning of the document.  This will cause troff (1) to
       ignore everything between .R1 and .R2.  The effect of some
       commands can also be achieved by options.  These options are
       supported mainly for compatibility with AT&T refer.  It is
       usually more convenient to use commands.

       refer generates .lf requests so that file names and line numbers
       in messages produced by commands that read refer output will be
       correct; it also interprets lines beginning with .lf so that file
       names and line numbers in the messages and .lf lines that it
       produces will be accurate even if the input has been preprocessed
       by a command such as soelim(1).

Options         top

       --help displays a usage message, while -v and --version show
       version information; all exit afterward.

       Most options are equivalent to commands (for a description of
       these commands, see subsection “Commands” below).

       -b     no-label-in-text; no-label-in-reference

       -e     accumulate

       -n     no-default-database

       -C     compatible

       -P     move-punctuation

       -S     label "(A.n|Q) ', ' (D.y|D)"; bracket-label " (" ) "; "

       -a n   reverse An

       -c fields
              capitalize fields

       -f n   label %n

       -i fields
              search-ignore fields

       -k     label L~%a

       -k field
              label field~%a

       -l     label A.nD.y%a

       -l m   label A.n+mD.y%a

       -l ,n  label A.nD.y-n%a

       -l m,n label A.n+mD.y-n%a

       -p db-file
              database db-file

       -s spec
              sort spec

       -t n   search-truncate n

       These options are equivalent to the following commands with the
       addition that the file names specified on the command line are
       processed as if they were arguments to the bibliography command
       instead of in the normal way:

       -B     annotate X AP; no-label-in-reference

       -B field.macro
              annotate field macro; no-label-in-reference

       The following options have no equivalent commands:

       -R     Don't recognize lines beginning with .R1/.R2.

Usage         top

   Bibliographic databases
       The bibliographic database is a text file consisting of records
       separated by one or more blank lines.  Within each record fields
       start with a % at the beginning of a line.  Each field has a one
       character name that immediately follows the %.  It is best to use
       only upper and lower case letters for the names of fields.  The
       name of the field should be followed by exactly one space, and
       then by the contents of the field.  Empty fields are ignored.
       The conventional meaning of each field is as follows:

       %A     The name of an author.  If the name contains a title such
              as Jr. at the end, it should be separated from the last
              name by a comma.  There can be multiple occurrences of the
              %A field.  The order is significant.  It is a good idea
              always to supply an %A field or a %Q field.

       %B     For an article that is part of a book, the title of the
              book.

       %C     The place (city) of publication.

       %D     The date of publication.  The year should be specified in
              full.  If the month is specified, the name rather than the
              number of the month should be used, but only the first
              three letters are required.  It is a good idea always to
              supply a %D field; if the date is unknown, a value such as
              in press or unknown can be used.

       %E     For an article that is part of a book, the name of an
              editor of the book.  Where the work has editors and no
              authors, the names of the editors should be given as %A
              fields and , (ed.) or , (eds.) should be appended to the
              last author.

       %G     U.S. government ordering number.

       %I     The publisher (issuer).

       %J     For an article in a journal, the name of the journal.

       %K     Keywords to be used for searching.

       %L     Label.

       %N     Journal issue number.

       %O     Other information.  This is usually printed at the end of
              the reference.

       %P     Page number.  A range of pages can be specified as m-n.

       %Q     The name of the author, if the author is not a person.
              This will only be used if there are no %A fields.  There
              can only be one %Q field.

       %R     Technical report number.

       %S     Series name.

       %T     Title.  For an article in a book or journal, this should
              be the title of the article.

       %V     Volume number of the journal or book.

       %X     Annotation.

       For all fields except %A and %E, if there is more than one
       occurrence of a particular field in a record, only the last such
       field will be used.

       If accent strings are used, they should follow the character to
       be accented.  This means that the .AM macro must be used with the
       ms macros.  Accent strings should not be quoted: use one \ rather
       than two.

   Citations
       Citations have a characteristic format.
              .[opening-text
              flags keywords
              fields
              .]closing-text

       The opening-text, closing-text, and flags components are
       optional.  Only one of the keywords and fields components need be
       specified.

       The keywords component says to search the bibliographic databases
       for a reference that contains all the words in keywords.  It is
       an error if more than one reference if found.

       The fields components specifies additional fields to replace or
       supplement those specified in the reference.  When references are
       being accumulated and the keywords component is non-empty, then
       additional fields should be specified only on the first occasion
       that a particular reference is cited, and will apply to all
       citations of that reference.

       The opening-text and closing-text component specifies strings to
       be used to bracket the label instead of the strings specified in
       the bracket-label command.  If either of these components is non-
       empty, the strings specified in the bracket-label command will
       not be used; this behavior can be altered using the [ and ]
       flags.  Leading and trailing spaces are significant for these
       components.

       The flags component is a list of non-alphanumeric characters each
       of which modifies the treatment of this particular citation.
       AT&T refer will treat these flags as part of the keywords and so
       will ignore them since they are non-alphanumeric.  The following
       flags are currently recognized.

       #      Use the label specified by the short-label command,
              instead of that specified by the label command.  If no
              short label has been specified, the normal label will be
              used.  Typically the short label is used with author-date
              labels and consists of only the date and possibly a
              disambiguating letter; the “#” is supposed to be
              suggestive of a numeric type of label.

       [      Precede opening-text with the first string specified in
              the bracket-label command.

       ]      Follow closing-text with the second string specified in
              the bracket-label command.

       One advantages of using the [ and ] flags rather than including
       the brackets in opening-text and closing-text is that you can
       change the style of bracket used in the document just by changing
       the bracket-label command.  Another advantage is that sorting and
       merging of citations will not necessarily be inhibited if the
       flags are used.

       If a label is to be inserted into the text, it will be attached
       to the line preceding the .[ line.  If there is no such line,
       then an extra line will be inserted before the .[ line and a
       warning will be given.

       There is no special notation for making a citation to multiple
       references.  Just use a sequence of citations, one for each
       reference.  Don't put anything between the citations.  The labels
       for all the citations will be attached to the line preceding the
       first citation.  The labels may also be sorted or merged.  See
       the description of the <> label expression, and of the
       sort-adjacent-labels and abbreviate-label-ranges command.  A
       label will not be merged if its citation has a non-empty opening-
       text or closing-text.  However, the labels for a citation using
       the ] flag and without any closing-text immediately followed by a
       citation using the [ flag and without any opening-text may be
       sorted and merged even though the first citation's opening-text
       or the second citation's closing-text is non-empty.  (If you wish
       to prevent this, just make the first citation's closing-text \&.)

   Commands
       Commands are contained between lines starting with .R1 and .R2.
       Recognition of these lines can be prevented by the -R option.
       When a .R1 line is recognized any accumulated references are
       flushed out.  Neither .R1 nor .R2 lines, nor anything between
       them is output.

       Commands are separated by newlines or semicolons.  A hash sign
       (#) introduces a comment that extends to the end of the line, but
       does not conceal the newline.  Each command is broken up into
       words.  Words are separated by spaces or tabs.  A word that
       begins with a (neutral) double quote (") extends to the next
       double quote that is not followed by another double quote.  If
       there is no such double quote, the word extends to the end of the
       line.  Pairs of double quotes in a word beginning with a double
       quote collapse to a single double quote.  Neither a hash sign nor
       a semicolon is recognized inside double quotes.  A line can be
       continued by ending it with \[rs]; this works everywhere except
       after a hash sign.

       Each command name that is marked with * has an associated
       negative command no-name that undoes the effect of name.  For
       example, the no-sort command specifies that references should not
       be sorted.  The negative commands take no arguments.

       In the following description each argument must be a single word;
       field is used for a single upper or lower case letter naming a
       field; fields is used for a sequence of such letters; m and n are
       used for a non-negative numbers; string is used for an arbitrary
       string; file is used for the name of a file.

       abbreviate* fields string1 string2 string3 string4
              Abbreviate the first names of fields.  An initial letter
              will be separated from another initial letter by string1,
              from the last name by string2, and from anything else
              (such as a von or de) by string3.  These default to a
              period followed by a space.  In a hyphenated first name,
              the initial of the first part of the name will be
              separated from the hyphen by string4; this defaults to a
              period.  No attempt is made to handle any ambiguities that
              might result from abbreviation.  Names are abbreviated
              before sorting and before label construction.

       abbreviate-label-ranges* string
              Three or more adjacent labels that refer to consecutive
              references will be abbreviated to a label consisting of
              the first label, followed by string followed by the last
              label.  This is mainly useful with numeric labels.  If
              string is omitted it defaults to “-”.

       accumulate*
              Accumulate references instead of writing out each
              reference as it is encountered.  Accumulated references
              will be written out whenever a reference of the form

                            .[
                            $LIST$
                            .]
              is encountered, after all input files have been processed,
              and whenever a .R1 line is recognized.

       annotate* field string
              field is an annotation; print it at the end of the
              reference as a paragraph preceded by the line

                     .string

              If string is omitted it will default to AP; if field is
              also omitted it will default to X.  Only one field can be
              an annotation.

       articles string ...
              Each string is a definite or indefinite article, and
              should be ignored at the beginning of T fields when
              sorting.  Initially, the, a and an are recognized as
              articles.

       bibliography file ...
              Write out all the references contained in each
              bibliographic database file.  This command should come
              last in a .R1/.R2 block.

       bracket-label string1 string2 string3
              In the text, bracket each label with string1 and string2.
              An occurrence of string2 immediately followed by string1
              will be turned into string3.  The default behavior is as
              follows.

                     bracket-label \*([. \*(.] ", "

       capitalize fields
              Convert fields to caps and small caps.

       compatible*
              Recognize .R1 and .R2 even when followed by a character
              other than space or newline.

       database file ...
              Search each bibliographic database file.  For each file,
              if an index file.i created by indxbib(1) exists, then it
              will be searched instead; each index can cover multiple
              databases.

       date-as-label* string
              string is a label expression that specifies a string with
              which to replace the D field after constructing the label.
              See subsection “Label expressions” below for a description
              of label expressions.  This command is useful if you do
              not want explicit labels in the reference list, but
              instead want to handle any necessary disambiguation by
              qualifying the date in some way.  The label used in the
              text would typically be some combination of the author and
              date.  In most cases you should also use the
              no-label-in-reference command.  For example,

                     date-as-label D.+yD.y%a*D.-y

              would attach a disambiguating letter to the year part of
              the D field in the reference.

       default-database*
              The default database should be searched.  This is the
              default behavior, so the negative version of this command
              is more useful.  refer determines whether the default
              database should be searched on the first occasion that it
              needs to do a search.  Thus a no-default-database command
              must be given before then, in order to be effective.

       discard* fields
              When the reference is read, fields should be discarded; no
              string definitions for fields will be output.  Initially,
              fields are XYZ.

       et-al* string m n
              Control use of et al. in the evaluation of @ expressions
              in label expressions.  If the number of authors needed to
              make the author sequence unambiguous is u and the total
              number of authors is t then the last t-u authors will be
              replaced by string provided that t-u is not less than m
              and t is not less than n.  The default behavior is as
              follows.

                     et-al " et al" 2 3

              Note the absence of a dot from the end of the
              abbreviation, which is arguably not correct.  (Et al[.]
              is short for et alli, as etc. is short for et cetera.)

       include file
              Include file and interpret the contents as commands.

       join-authors string1 string2 string3
              Join multiple authors together with strings.  When there
              are exactly two authors, they will be joined with string1.
              When there are more than two authors, all but the last two
              will be joined with string2, and the last two authors will
              be joined with string3.  If string3 is omitted, it will
              default to string1; if string2 is also omitted it will
              also default to string1.  For example,
                     join-authors " and " ", " ", and "
              will restore the default method for joining authors.

       label-in-reference*
              When outputting the reference, define the string [F to be
              the reference's label.  This is the default behavior, so
              the negative version of this command is more useful.

       label-in-text*
              For each reference output a label in the text.  The label
              will be separated from the surrounding text as described
              in the bracket-label command.  This is the default
              behavior, so the negative version of this command is more
              useful.

       label string
              string is a label expression describing how to label each
              reference.

       separate-label-second-parts string
              When merging two-part labels, separate the second part of
              the second label from the first label with string.  See
              the description of the <> label expression.

       move-punctuation*
              In the text, move any punctuation at the end of line past
              the label.  It is usually a good idea to give this command
              unless you are using superscripted numbers as labels.

       reverse* string
              Reverse the fields whose names are in string.  Each field
              name can be followed by a number which says how many such
              fields should be reversed.  If no number is given for a
              field, all such fields will be reversed.

       search-ignore* fields
              While searching for keys in databases for which no index
              exists, ignore the contents of fields.  Initially, fields
              XYZ are ignored.

       search-truncate* n
              Only require the first n characters of keys to be given.
              In effect when searching for a given key words in the
              database are truncated to the maximum of n and the length
              of the key.  Initially, n is 6.

       short-label* string
              string is a label expression that specifies an alternative
              (usually shorter) style of label.  This is used when the #
              flag is given in the citation.  When using author-date
              style labels, the identity of the author or authors is
              sometimes clear from the context, and so it may be
              desirable to omit the author or authors from the label.
              The short-label command will typically be used to specify
              a label containing just a date and possibly a
              disambiguating letter.

       sort* string
              Sort references according to string.  References will
              automatically be accumulated.  string should be a list of
              field names, each followed by a number, indicating how
              many fields with the name should be used for sorting.  “+”
              can be used to indicate that all the fields with the name
              should be used.  Also . can be used to indicate the
              references should be sorted using the (tentative) label.
              (Subsection “Label expressions” below describes the
              concept of a tentative label.)

       sort-adjacent-labels*
              Sort labels that are adjacent in the text according to
              their position in the reference list.  This command should
              usually be given if the abbreviate-label-ranges command
              has been given, or if the label expression contains a <>
              expression.  This will have no effect unless references
              are being accumulated.

   Label expressions
       Label expressions can be evaluated both normally and tentatively.
       The result of normal evaluation is used for output.  The result
       of tentative evaluation, called the tentative label, is used to
       gather the information that normal evaluation needs to
       disambiguate the label.  Label expressions specified by the
       date-as-label and short-label commands are not evaluated
       tentatively.  Normal and tentative evaluation are the same for
       all types of expression other than @, *, and % expressions.  The
       description below applies to normal evaluation, except where
       otherwise specified.

       field
       field n
              The n-th part of field.  If n is omitted, it defaults
              to 1.

       'string'
              The characters in string literally.

       @      All the authors joined as specified by the join-authors
              command.  The whole of each author's name will be used.
              However, if the references are sorted by author (that is,
              the sort specification starts with “A+”), then authors'
              last names will be used instead, provided that this does
              not introduce ambiguity, and also an initial subsequence
              of the authors may be used instead of all the authors,
              again provided that this does not introduce ambiguity.
              The use of only the last name for the i-th author of some
              reference is considered to be ambiguous if there is some
              other reference, such that the first i-1 authors of the
              references are the same, the i-th authors are not the
              same, but the i-th authors last names are the same.  A
              proper initial subsequence of the sequence of authors for
              some reference is considered to be ambiguous if there is a
              reference with some other sequence of authors which also
              has that subsequence as a proper initial subsequence.
              When an initial subsequence of authors is used, the
              remaining authors are replaced by the string specified by
              the et-al command; this command may also specify
              additional requirements that must be met before an initial
              subsequence can be used.  @ tentatively evaluates to a
              canonical representation of the authors, such that authors
              that compare equally for sorting purpose will have the
              same representation.

       %n
       %a
       %A
       %i
       %I     The serial number of the reference formatted according to
              the character following the %.  The serial number of a
              reference is 1 plus the number of earlier references with
              same tentative label as this reference.  These expressions
              tentatively evaluate to an empty string.

       expr*  If there is another reference with the same tentative
              label as this reference, then expr, otherwise an empty
              string.  It tentatively evaluates to an empty string.

       expr+n
       expr-n The first (+) or last (-) n upper or lower case letters or
              digits of expr.  roff special characters (such as \('a)
              count as a single letter.  Accent strings are retained but
              do not count towards the total.

       expr.l expr converted to lowercase.

       expr.u expr converted to uppercase.

       expr.c expr converted to caps and small caps.

       expr.r expr reversed so that the last name is first.

       expr.a expr with first names abbreviated.  Fields specified in
              the abbreviate command are abbreviated before any labels
              are evaluated.  Thus .a is useful only when you want a
              field to be abbreviated in a label but not in a reference.

       expr.y The year part of expr.

       expr.+y
              The part of expr before the year, or the whole of expr if
              it does not contain a year.

       expr.-y
              The part of expr after the year, or an empty string if
              expr does not contain a year.

       expr.n The last name part of expr.

       expr1~expr2
              expr1 except that if the last character of expr1 is - then
              it will be replaced by expr2.

       expr1 expr2
              The concatenation of expr1 and expr2.

       expr1|expr2
              If expr1 is non-empty then expr1 otherwise expr2.

       expr1&expr2
              If expr1 is non-empty then expr2 otherwise an empty
              string.

       expr1?expr2:expr3
              If expr1 is non-empty then expr2 otherwise expr3.

       <expr> The label is in two parts, which are separated by expr.
              Two adjacent two-part labels which have the same first
              part will be merged by appending the second part of the
              second label onto the first label separated by the string
              specified in the separate-label-second-parts command
              (initially, a comma followed by a space); the resulting
              label will also be a two-part label with the same first
              part as before merging, and so additional labels can be
              merged into it.  It is permissible for the first part to
              be empty; this may be desirable for expressions used in
              the short-label command.

       (expr) The same as expr.  Used for grouping.

       The above expressions are listed in order of precedence (highest
       first); & and | have the same precedence.

   Macro interface
       Each reference starts with a call to the macro ]-.  The string [F
       will be defined to be the label for this reference, unless the
       no-label-in-reference command has been given.  There then follows
       a series of string definitions, one for each field: string [X
       corresponds to field X.  The number register [P is set to 1 if
       the P field contains a range of pages.  The [T, [A and [O number
       registers are set to 1 according as the T, A and O fields end
       with one of the characters .?!.  The [E number register will be
       set to 1 if the [E string contains more than one name.  The
       reference is followed by a call to the ][ macro.  The first
       argument to this macro gives a number representing the type of
       the reference.  If a reference contains a J field, it will be
       classified as type 1, otherwise if it contains a B field, it will
       be type 3, otherwise if it contains a G or R field it will be
       type 4, otherwise if it contains an I field it will be type 2,
       otherwise it will be type 0.  The second argument is a symbolic
       name for the type: other, journal-article, book, article-in-book,
       or tech-report.  Groups of references that have been accumulated
       or are produced by the bibliography command are preceded by a
       call to the ]< macro and followed by a call to the ]> macro.

Environment         top

       REFER  If set, overrides the default database.

Files         top

       /usr/dict/papers/Ind
              Default database.

       file.i Index files.

       refer uses temporary files.  See the groff(1) man page for
       details of where such files are created.

Bugs         top

       In label expressions, <> expressions are ignored inside .char
       expressions.

See also         top

       “Some Applications of Inverted Indexes on the Unix System”, by M.
       E. Lesk, 1978, AT&T Bell Laboratories Computing Science Technical
       Report No. 69.

       indxbib(1), lookbib(1), lkbib(1)

COLOPHON         top

       This page is part of the groff (GNU troff) project.  Information
       about the project can be found at 
       ⟨http://www.gnu.org/software/groff/⟩.  If you have a bug report
       for this manual page, see ⟨http://www.gnu.org/software/groff/⟩.
       This page was obtained from the project's upstream Git repository
       ⟨https://git.savannah.gnu.org/git/groff.git⟩ on 2021-04-01.  (At
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groff 1.23.0.rc1.56-5346-dirt1y3 November 2020                    refer(1)

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